STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_4838TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: pab:PAB0486 putative monovalent cation/H+ antiporter subunit G. (130 aa)    
Predicted Functional Partners:
Caci_4834
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mhu:Mhun_2586 putative monovalent cation/H+ antiporter subunit D.
 
 
 0.999
Caci_4835
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ton:TON_0493 multisubunit Na+/H+ antiporter, putative MnhC subunit.
 
 
 0.999
Caci_4839
PFAM: multiple resistance and pH regulation protein F; KEGG: pab:PAB3177 putative monovalent cation/H+ antiporter subunit F.
 
 
 0.999
Caci_4836
Hypothetical protein; KEGG: pho:PH1429 putative monovalent cation/H+ antiporter subunit B.
 
 
 0.998
Caci_4840
KEGG: mgm:Mmc1_2216 membrane bound protein complex subunit MbxA.
  
 
 0.998
Caci_0852
KEGG: sgr:SGR_2918 putative NADH dehydrogenase chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
 
 0.967
Caci_7680
KEGG: sma:SAV_4848 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein.
 
 
 0.964
Caci_4837
KEGG: mrd:Mrad2831_0684 hypothetical protein.
  
 
 0.917
Caci_4833
KEGG: saq:Sare_2528 hypothetical protein.
       0.773
Caci_7741
PFAM: protein of unknown function DUF503; KEGG: sma:SAV_2550 hypothetical protein.
   
    0.659
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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