STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_4946Cellulase; PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; KEGG: bha:BH0603 endo-beta-1,4-glucanase (celulase B); Belongs to the glycosyl hydrolase 5 (cellulase A) family. (589 aa)    
Predicted Functional Partners:
Caci_6683
Cellulose 1,4-beta-cellobiosidase; KEGG: hau:Haur_2136 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase family 6.
 
 
 0.776
Caci_4881
PFAM: glycoside hydrolase family 6; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: sma:SAV_557 cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
 
 
 0.774
Caci_4288
PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: sco:SCO5786 secreted hydrolase.
  
 0.748
Caci_5221
PFAM: glycoside hydrolase family 3 domain protein; Ig domain protein group 2 domain protein; KEGG: ote:Oter_3219 beta-glucosidase.
 
 
 0.733
Caci_4883
PFAM: glycoside hydrolase family 3 domain protein; Ig domain protein group 2 domain protein; KEGG: bfr:BF0832 beta-xylosidase.
 
  
 0.724
Caci_4325
PFAM: glycoside hydrolase family 3 domain protein; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: ote:Oter_3219 beta-glucosidase.
 
  
 0.722
Caci_4651
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; Ig domain protein group 2 domain protein; KEGG: ote:Oter_3219 beta-glucosidase.
 
  
 0.722
Caci_4940
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: sma:SAV_2578 sugar hydrolase.
 
  
 0.711
Caci_6876
PFAM: glycoside hydrolase family 76; Ricin B lectin; KEGG: bfr:BF0347 alpha-1,6-mannanase.
  
 
 0.680
Caci_1349
Beta-galactosidase; KEGG: sgr:SGR_371 putative beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
    
 0.677
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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