STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_5276Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sma:SAV_7417 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (351 aa)    
Predicted Functional Partners:
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.996
Caci_5278
TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: sma:SAV_7419 secreted solute-binding lipoprotein.
 0.994
Caci_5277
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sco:SCO0809 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.964
Caci_4364
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sgr:SGR_6602 putative sugar uptake ABC transporter solute-binding protein.
 
 0.961
Caci_4703
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smd:Smed_5743 ABC transporter related.
 
 0.912
Caci_5009
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll7081 ribose ABC transporter, ATP- binding protein.
 
 0.905
Caci_4365
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_6603 putative sugar uptake ABC transporter ATP-binding protein.
 
 0.890
Caci_4923
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_7280 sugar ABC transporter ATP- binding protein.
 
 0.889
Caci_4718
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cmi:CMM_0880 putative sugar ABC transporter, ATPase component.
 
 0.885
Caci_1455
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_7280 sugar ABC transporter ATP- binding protein.
 
 0.879
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.