Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_2233 | Caci_5308 | KEGG: msm:MSMEG_2307 hypothetical protein. | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | 0.673 |
Caci_2233 | Caci_5872 | KEGG: msm:MSMEG_2307 hypothetical protein. | KEGG: nfa:nfa18080 hypothetical protein. | 0.599 |
Caci_2233 | Caci_6160 | KEGG: msm:MSMEG_2307 hypothetical protein. | Conserved hypothetical protein; KEGG: msm:MSMEG_2850 mycobacterial family protein 11 protein. | 0.602 |
Caci_2233 | Caci_6204 | KEGG: msm:MSMEG_2307 hypothetical protein. | KEGG: sen:SACE_3822 hypothetical protein. | 0.561 |
Caci_2233 | Caci_6491 | KEGG: msm:MSMEG_2307 hypothetical protein. | KEGG: saq:Sare_2317 luciferase family protein. | 0.745 |
Caci_2233 | Caci_7611 | KEGG: msm:MSMEG_2307 hypothetical protein. | TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: sgr:SGR_4501 hypothetical protein. | 0.699 |
Caci_2233 | Caci_7612 | KEGG: msm:MSMEG_2307 hypothetical protein. | TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; nitroreductase; KEGG: sco:SCO3037 F420-0--gamma-glutamyl ligase. | 0.718 |
Caci_5308 | Caci_2233 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | KEGG: msm:MSMEG_2307 hypothetical protein. | 0.673 |
Caci_5308 | Caci_5872 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | KEGG: nfa:nfa18080 hypothetical protein. | 0.718 |
Caci_5308 | Caci_5942 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | KEGG: rrs:RoseRS_1517 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein. | 0.768 |
Caci_5308 | Caci_5951 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | PFAM: Luciferase-like monooxygenase; KEGG: tfu:Tfu_1926 hypothetical protein. | 0.743 |
Caci_5308 | Caci_6160 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | Conserved hypothetical protein; KEGG: msm:MSMEG_2850 mycobacterial family protein 11 protein. | 0.732 |
Caci_5308 | Caci_6204 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | KEGG: sen:SACE_3822 hypothetical protein. | 0.706 |
Caci_5308 | Caci_6491 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | KEGG: saq:Sare_2317 luciferase family protein. | 0.697 |
Caci_5308 | Caci_7611 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: sgr:SGR_4501 hypothetical protein. | 0.732 |
Caci_5308 | Caci_7612 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; nitroreductase; KEGG: sco:SCO3037 F420-0--gamma-glutamyl ligase. | 0.787 |
Caci_5308 | Caci_7696 | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | PFAM: Luciferase-like monooxygenase; KEGG: stp:Strop_0085 luciferase family protein. | 0.753 |
Caci_5872 | Caci_2233 | KEGG: nfa:nfa18080 hypothetical protein. | KEGG: msm:MSMEG_2307 hypothetical protein. | 0.599 |
Caci_5872 | Caci_5308 | KEGG: nfa:nfa18080 hypothetical protein. | PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein. | 0.718 |
Caci_5872 | Caci_5942 | KEGG: nfa:nfa18080 hypothetical protein. | KEGG: rrs:RoseRS_1517 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein. | 0.779 |
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