Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Caci_0115 | Caci_3297 | Caci_0115 | Caci_3297 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro10371 major facilitator superfamily multidrug resistance protein. | PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator transporter. | 0.554 |
Caci_0115 | Caci_5575 | Caci_0115 | Caci_5575 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro10371 major facilitator superfamily multidrug resistance protein. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | 0.717 |
Caci_3297 | Caci_0115 | Caci_3297 | Caci_0115 | PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator transporter. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro10371 major facilitator superfamily multidrug resistance protein. | 0.554 |
Caci_3297 | Caci_5575 | Caci_3297 | Caci_5575 | PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator transporter. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | 0.461 |
Caci_4580 | Caci_5575 | Caci_4580 | Caci_5575 | PFAM: major facilitator superfamily MFS_1; KEGG: fre:Franean1_6965 major facilitator transporter. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | 0.424 |
Caci_5575 | Caci_0115 | Caci_5575 | Caci_0115 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro10371 major facilitator superfamily multidrug resistance protein. | 0.717 |
Caci_5575 | Caci_3297 | Caci_5575 | Caci_3297 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator transporter. | 0.461 |
Caci_5575 | Caci_4580 | Caci_5575 | Caci_4580 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | PFAM: major facilitator superfamily MFS_1; KEGG: fre:Franean1_6965 major facilitator transporter. | 0.424 |
Caci_5575 | Caci_5576 | Caci_5575 | Caci_5576 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | PFAM: regulatory protein TetR; KEGG: mmi:MMAR_2831 transcriptional regulator. | 0.664 |
Caci_5575 | Caci_5577 | Caci_5575 | Caci_5577 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | SMART: von Willebrand factor type A; KEGG: pvi:Cvib_0122 hypothetical protein. | 0.410 |
Caci_5575 | argS-2 | Caci_5575 | Caci_5574 | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | KEGG: sgr:SGR_4178 putative arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase. | 0.507 |
Caci_5576 | Caci_5575 | Caci_5576 | Caci_5575 | PFAM: regulatory protein TetR; KEGG: mmi:MMAR_2831 transcriptional regulator. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | 0.664 |
Caci_5576 | Caci_5577 | Caci_5576 | Caci_5577 | PFAM: regulatory protein TetR; KEGG: mmi:MMAR_2831 transcriptional regulator. | SMART: von Willebrand factor type A; KEGG: pvi:Cvib_0122 hypothetical protein. | 0.552 |
Caci_5577 | Caci_5575 | Caci_5577 | Caci_5575 | SMART: von Willebrand factor type A; KEGG: pvi:Cvib_0122 hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | 0.410 |
Caci_5577 | Caci_5576 | Caci_5577 | Caci_5576 | SMART: von Willebrand factor type A; KEGG: pvi:Cvib_0122 hypothetical protein. | PFAM: regulatory protein TetR; KEGG: mmi:MMAR_2831 transcriptional regulator. | 0.552 |
argS-2 | Caci_5575 | Caci_5574 | Caci_5575 | KEGG: sgr:SGR_4178 putative arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase. | PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro00919 major facilitator superfamily multidrug resistance protein. | 0.507 |