STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_5882KEGG: fal:FRAAL3455 hypothetical protein. (121 aa)    
Predicted Functional Partners:
Caci_7026
PFAM: protein of unknown function DUF664; KEGG: sgr:SGR_5793 hypothetical protein.
 
     0.710
Caci_6133
KEGG: kra:Krad_4121 hypothetical protein.
  
     0.697
Caci_3194
PFAM: protein of unknown function DUF664; KEGG: sco:SCO4342 hypothetical protein.
 
     0.693
Caci_8812
PFAM: protein of unknown function DUF664; KEGG: stp:Strop_1293 hypothetical protein.
 
     0.657
Caci_5883
KEGG: msm:MSMEG_2620 hypothetical protein.
 
     0.640
mca
Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
     0.593
Caci_8367
PFAM: protein of unknown function DUF664; KEGG: sco:SCO7722 hypothetical protein.
 
     0.591
Caci_7335
PFAM: DSBA oxidoreductase; KEGG: kra:Krad_3524 hypothetical protein.
  
     0.576
mshD
Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
  
     0.568
Caci_5884
PFAM: ribonuclease II; KEGG: nca:Noca_2017 ribonuclease II.
       0.549
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.