STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_6102Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (247 aa)    
Predicted Functional Partners:
Caci_6103
PFAM: protein of unknown function DUF152; KEGG: sco:SCO2081 hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
  
  
 0.979
sepF
Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.956
Caci_6100
PFAM: protein of unknown function YGGT; KEGG: tfu:Tfu_1117 hypothetical protein.
  
  
 0.843
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.843
Caci_6099
PFAM: DivIVA family protein; KEGG: sgr:SGR_5428 hypothetical protein.
  
  
 0.800
Caci_0576
Hypothetical protein; KEGG: ace:Acel_1027 DivIVA family protein.
  
  
 0.653
Caci_7945
KEGG: ace:Acel_1838 hypothetical protein.
  
  
 0.653
rpmJ
TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: kra:Krad_0712 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
  
    0.617
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
 
  
 0.616
rpmC
TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: sma:SAV_4934 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
   
    0.608
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.