Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_6223 | Caci_6224 | KEGG: sen:SACE_2043 hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_3462 transporter, major facilitator family. | 0.723 |
Caci_6223 | Caci_6225 | KEGG: sen:SACE_2043 hypothetical protein. | Hypothetical protein. | 0.450 |
Caci_6223 | Caci_6226 | KEGG: sen:SACE_2043 hypothetical protein. | Hypothetical protein. | 0.450 |
Caci_6224 | Caci_6223 | PFAM: major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_3462 transporter, major facilitator family. | KEGG: sen:SACE_2043 hypothetical protein. | 0.723 |
Caci_6224 | Caci_6225 | PFAM: major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_3462 transporter, major facilitator family. | Hypothetical protein. | 0.477 |
Caci_6224 | Caci_6226 | PFAM: major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_3462 transporter, major facilitator family. | Hypothetical protein. | 0.477 |
Caci_6225 | Caci_6223 | Hypothetical protein. | KEGG: sen:SACE_2043 hypothetical protein. | 0.450 |
Caci_6225 | Caci_6224 | Hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_3462 transporter, major facilitator family. | 0.477 |
Caci_6225 | Caci_6226 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Caci_6226 | Caci_6223 | Hypothetical protein. | KEGG: sen:SACE_2043 hypothetical protein. | 0.450 |
Caci_6226 | Caci_6224 | Hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_3462 transporter, major facilitator family. | 0.477 |
Caci_6226 | Caci_6225 | Hypothetical protein. | Hypothetical protein. | 0.773 |