STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_6259PFAM: phosphoesterase; KEGG: mpa:MAP3432 hypothetical protein. (292 aa)    
Predicted Functional Partners:
Caci_0180
KEGG: sma:SAV_1715 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
    
  0.902
Caci_0605
Phospholipase C; PFAM: phosphoesterase; KEGG: rha:RHA1_ro02476 phospholipase C.
    
  0.902
Caci_3844
Phospholipase C; PFAM: phosphoesterase; KEGG: mab:MAB_0555 non-hemolytic phospholipase C.
    
  0.902
Caci_5107
Phospholipase C, phosphocholine-specific; KEGG: cvi:CV_0909 non-hemolytic phospholipase C precursor; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
    
  0.902
Caci_5955
Phospholipase C; PFAM: phosphoesterase; KEGG: mab:MAB_0555 non-hemolytic phospholipase C.
    
  0.902
Caci_7366
Phospholipase C, phosphocholine-specific; KEGG: cvi:CV_0909 non-hemolytic phospholipase C precursor; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein.
    
  0.902
Caci_7483
PFAM: phosphoesterase; KEGG: cjk:jk0010 putative acid phosphatase.
    
  0.902
Caci_6736
PFAM: phosphatidylinositol-specific phospholipase C X region; SMART: phosphatidylinositol-specific phospholipase C X region; KEGG: sgr:SGR_3955 putative phosphatidyl inositol- specific phospholipase C.
     
  0.900
Caci_5734
KEGG: mav:MAV_4459 hypothetical protein.
  
     0.697
Caci_2468
PFAM: permease; KEGG: mmi:MMAR_1754 hypothetical protein.
  
     0.651
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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