STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_6402PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sen:SACE_3918 dimethylaniline monooxygenase (N-oxide forming). (399 aa)    
Predicted Functional Partners:
Caci_4737
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
    
  0.902
Caci_2734
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sen:SACE_3091 oxidoreductase, iron-sulphur binding subunit.
     
  0.900
Caci_2735
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: sen:SACE_3092 xanthine dehydrogenase FAD- binding subunit.
     
  0.900
Caci_2736
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sen:SACE_3093 xanthine dehydrogenase molybdopterin binding subunit.
     
  0.900
Caci_6401
KEGG: sen:SACE_3919 hypothetical protein.
 
     0.899
Caci_0759
PFAM: glycosyl transferase group 1; KEGG: sma:SAV_5354 glycosyl transferase.
  
   0.650
Caci_6479
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: fre:Franean1_3684 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
     0.479
Caci_6484
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sco:SCO5077 hypothetical protein.
  
     0.479
Caci_7746
KEGG: rha:RHA1_ro08454 hypothetical protein.
  
     0.400
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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