STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_6409PFAM: Peptidase S53 propeptide; KEGG: ace:Acel_1461 cell wall binding repeat 2- containing protein. (1027 aa)    
Predicted Functional Partners:
Caci_0418
Protease-like protein; KEGG: bmv:BMASAVP1_A0748 serine protease.
  
     0.771
Caci_1967
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bpd:BURPS668_3032 putative lipoprotein.
  
     0.767
Caci_3631
Serine protease; KEGG: bmv:BMASAVP1_A0748 serine protease.
  
     0.766
Caci_0446
KEGG: bac:BamMC406_0814 peptidase S8 and S53 subtilisin kexin sedolisin.
  
     0.765
Caci_2539
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bam:Bamb_0804 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.762
Caci_1999
Protease-like protein; KEGG: bmn:BMA10247_2032 putative lipoprotein.
  
     0.761
Caci_6111
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bam:Bamb_0804 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.759
Caci_7461
PFAM: Ig family protein; peptidase S8 and S53 subtilisin kexin sedolisin; Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; KEGG: dac:Daci_3662 Ig family protein.
  
     0.759
Caci_8051
SMART: Pyrrolo-quinoline quinone; KEGG: ace:Acel_0402 pyrrolo-quinoline quinone.
  
     0.550
Caci_6408
Hypothetical protein; KEGG: sco:SCP1.273c putative large secreted protein.
       0.539
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.