STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7097PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: fre:Franean1_6190 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (159 aa)    
Predicted Functional Partners:
Caci_7792
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.668
Caci_7098
PFAM: NUDIX hydrolase; KEGG: pzu:PHZ_c0948 mutator MutT protein.
       0.618
Caci_7099
PFAM: Silent information regulator protein Sir2; KEGG: nfa:nfa44580 Sir2 family regulator.
       0.601
Caci_7095
Transcriptional regulator, CdaR; PFAM: purine catabolism PurC domain protein; KEGG: stp:Strop_3007 purine catabolism PurC domain- containing protein.
       0.570
Caci_7096
PFAM: Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; Methyltransferase type 12; KEGG: fre:Franean1_2456 methyltransferase type 11.
       0.570
Caci_1560
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sma:SAV_5802 thiol-specific antioxidant protein.
  
   
0.504
Caci_0214
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mab:MAB_2246 thiol-specific antioxidant related protein/peroxidoxin BcpB.
  
     0.498
Caci_7100
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sgr:SGR_5508 AraC family transcriptional regulator.
       0.451
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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