STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7142PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: fjo:Fjoh_3835 amine oxidase. (624 aa)    
Predicted Functional Partners:
Caci_7453
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro05606 putrescine oxidase.
  
  
  0.939
Caci_7897
PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO4279 acetyltransferase.
  
  
 0.916
Caci_2627
PFAM: Copper amine oxidase; Copper amine oxidase N3-terminal; Copper amine oxidase N2-terminal; KEGG: rha:RHA1_ro02608 tyramine oxidase.
   
 
 0.915
Caci_0798
PFAM: Aldehyde Dehydrogenase; KEGG: nca:Noca_3529 aldehyde dehydrogenase (acceptor).
     
 0.904
Caci_2132
PFAM: Aldehyde Dehydrogenase; KEGG: sma:SAV_5852 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.904
Caci_7300
PFAM: Aldehyde Dehydrogenase; KEGG: sgr:SGR_5794 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.904
Caci_1323
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: nfa:nfa35090 putative dehydrogenase.
    
  0.902
Caci_2709
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sgr:SGR_6401 putative alcohol dehydrogenase.
     
  0.900
Caci_5895
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sma:SAV_5871 dehydrogenase.
     
  0.900
Caci_6462
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rha:RHA1_ro03285 aryl-alcohol dehydrogenase.
     
  0.900
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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