STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7320Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: tfu:Tfu_2295 hypothetical protein. (288 aa)    
Predicted Functional Partners:
Caci_6631
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fre:Franean1_6225 putative PAS/PAC sensor protein.
  
     0.748
Caci_2800
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: kra:Krad_1003 protein serine phosphatase with GAF(s) sensor(s).
  
     0.724
Caci_4531
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fre:Franean1_6225 putative PAS/PAC sensor protein.
  
     0.720
Caci_1919
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: kra:Krad_4080 protein serine phosphatase with GAF(s) sensor(s).
  
     0.716
Caci_7303
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sgr:SGR_4917 hypothetical protein.
 
 
 0.697
Caci_2880
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: fra:Francci3_1989 putative PAS/PAC sensor protein.
  
     0.690
Caci_1210
KEGG: sco:SCO5366 ATP synthase protein I.
  
     0.682
Caci_7283
TIGRFAM: rod shape-determining protein MreD; KEGG: sco:SCO2609 rod shape-determining protein.
  
     0.658
Caci_8449
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sgr:SGR_3306 putative anti-sigma factor.
  
     0.658
Caci_7734
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: tfu:Tfu_0551 putative lipoprotein.
  
    0.651
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.