STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7483PFAM: phosphoesterase; KEGG: cjk:jk0010 putative acid phosphatase. (545 aa)    
Predicted Functional Partners:
Caci_6259
PFAM: phosphoesterase; KEGG: mpa:MAP3432 hypothetical protein.
    
  0.902
Caci_2441
PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: sma:SAV_6694 hypothetical protein.
     
  0.900
Caci_3122
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sco:SCO1389 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyl-transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
Caci_1731
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: nfa:nfa26120 putative oxidoreductase.
     
  0.800
Caci_4459
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: nca:Noca_4005 glucose-methanol-choline oxidoreductase.
     
  0.800
Caci_0180
KEGG: sma:SAV_1715 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
  
  
 
0.752
Caci_0605
Phospholipase C; PFAM: phosphoesterase; KEGG: rha:RHA1_ro02476 phospholipase C.
  
  
 
0.752
Caci_3844
Phospholipase C; PFAM: phosphoesterase; KEGG: mab:MAB_0555 non-hemolytic phospholipase C.
  
  
 
0.752
Caci_5107
Phospholipase C, phosphocholine-specific; KEGG: cvi:CV_0909 non-hemolytic phospholipase C precursor; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
  
  
 
0.751
Caci_5955
Phospholipase C; PFAM: phosphoesterase; KEGG: mab:MAB_0555 non-hemolytic phospholipase C.
  
  
 
0.751
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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