Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_3278 | Caci_7575 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sen:SACE_3735 alcohol dehydrogenase, zinc- binding. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | 0.753 |
Caci_4998 | Caci_7575 | PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kra:Krad_2209 alcohol dehydrogenase. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | 0.666 |
Caci_7573 | Caci_7574 | KEGG: mgi:Mflv_4441 putative short chain dehydrogenase. | SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; KEGG: hypothetical protein. | 0.863 |
Caci_7573 | Caci_7575 | KEGG: mgi:Mflv_4441 putative short chain dehydrogenase. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | 0.460 |
Caci_7574 | Caci_7573 | SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; KEGG: hypothetical protein. | KEGG: mgi:Mflv_4441 putative short chain dehydrogenase. | 0.863 |
Caci_7574 | Caci_7575 | SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; KEGG: hypothetical protein. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | 0.504 |
Caci_7575 | Caci_3278 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sen:SACE_3735 alcohol dehydrogenase, zinc- binding. | 0.753 |
Caci_7575 | Caci_4998 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kra:Krad_2209 alcohol dehydrogenase. | 0.666 |
Caci_7575 | Caci_7573 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | KEGG: mgi:Mflv_4441 putative short chain dehydrogenase. | 0.460 |
Caci_7575 | Caci_7574 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_2980 dehydrogenase. | SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; KEGG: hypothetical protein. | 0.504 |