STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7586PFAM: GCN5-related N-acetyltransferase; KEGG: sgr:SGR_4530 putative acetyltransferase. (215 aa)    
Predicted Functional Partners:
Caci_7587
PFAM: protein of unknown function DUF1006; KEGG: sgr:SGR_4529 hypothetical protein.
     0.840
Caci_6831
PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV_4401 acetyltransferase.
  
     0.761
Caci_2370
PFAM: GCN5-related N-acetyltransferase; KEGG: sgr:SGR_5503 putative acetyltransferase.
  
     0.730
Caci_2283
PFAM: GCN5-related N-acetyltransferase; KEGG: esi:Exig_0409 GCN5-related N- acetyltransferase.
  
     0.708
Caci_8709
PFAM: GCN5-related N-acetyltransferase; KEGG: sgr:SGR_4300 putative ribosomal-protein- alanine N-acetyltransferase.
  
   
 0.653
Caci_8007
PFAM: GCN5-related N-acetyltransferase; KEGG: sgr:SGR_4577 putative ribosomal-protein- alanine N-acetyltransferase.
  
   
 0.612
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.576
Caci_1377
PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO2876 acetyltransferase.
  
     0.535
Caci_6765
PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO5503 acetyltransferase.
  
   
 0.485
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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