STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAPFAM: Glutaminase, core; KEGG: sma:SAV_1314 glutaminase; Belongs to the glutaminase family. (316 aa)    
Predicted Functional Partners:
Caci_5702
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: sgr:SGR_5483 putative glutamate synthase (NADPH) large subunit.
     
 0.974
Caci_8660
TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: aau:AAur_3971 glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.934
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.921
Caci_0557
Glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sgr:SGR_5302 putative glutamine synthetase.
    
 0.914
Caci_1700
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ace:Acel_0919 L-glutamine synthetase.
    
 0.914
Caci_1797
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: rxy:Rxyl_3196 L-glutamine synthetase.
    
 0.914
Caci_7410
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ace:Acel_0923 L-glutamine synthetase.
    
 0.914
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.910
Caci_5701
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nca:Noca_3021 glutamate synthase subunit beta.
   
 
 0.910
Caci_7717
Glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS); KEGG: sgr:SGR_2276 putative phosphosugar isomerases.
    
 0.910
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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