STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7768PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: sma:SAV_1915 acyl-CoA dehydrogenase. (397 aa)    
Predicted Functional Partners:
Caci_7769
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: sgr:SGR_1172 putative lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.828
Caci_2473
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ace:Acel_0685 electron transfer flavoprotein, alpha subunit.
 
 0.777
Caci_1298
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: fal:FRAAL5877 electron transfer flavoprotein subunit alpha.
 
 0.771
Caci_2472
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: nca:Noca_1815 electron transfer flavoprotein beta-subunit.
 
 
 0.745
Caci_1297
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: tfu:Tfu_0593 electron transfer flavoprotein, beta subunit.
 
 0.741
Caci_5261
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sgr:SGR_993 putative fatty acid oxidation complex alpha-subunit.
  
 0.707
Caci_6776
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sma:SAV_2234 fatty acid oxidation complex alpha-subunit.
  
 0.707
Caci_2596
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bte:BTH_II1669 polyketide biosynthesis enoyl- CoA hydratase.
  
 0.691
Caci_1237
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: nca:Noca_1784 3-hydroxyacyl-CoA dehydrogenase.
 
 0.662
Caci_8744
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sgr:SGR_3054 putative acyl-CoA dehydrogenase.
  
     0.653
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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