STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7805PFAM: Aldehyde Dehydrogenase; KEGG: xau:Xaut_3374 aldehyde dehydrogenase. (471 aa)    
Predicted Functional Partners:
Caci_5915
PFAM: proline racemase; KEGG: sma:SAV_1730 proline racemase; Belongs to the proline racemase family.
 
 
 
 0.762
Caci_7513
PFAM: dihydrodipicolinate synthetase; KEGG: sco:SCO1895 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
 0.648
Caci_5157
PFAM: dihydrodipicolinate synthetase; KEGG: sgr:SGR_5617 putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.634
Caci_7804
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sma:SAV_3075 peptidase.
     
 0.628
Caci_7806
PFAM: extracellular solute-binding protein family 1; KEGG: art:Arth_1705 extracellular solute-binding protein, family 1.
  
    0.605
Caci_5916
PFAM: dihydrodipicolinate synthetase; KEGG: sma:SAV_1731 dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.600
Caci_5917
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose- inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: sco:SCO6291 secreted oxidase.
 
  
 0.562
Caci_7803
PFAM: NUDIX hydrolase; Zinc ribbon NADH pyrophosphatase; NADH pyrophosphatase-like; KEGG: sgr:SGR_2339 hypothetical protein.
       0.547
Caci_1724
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: kra:Krad_4057 myo-inositol catabolism IolB domain-containing protein.
 
  
 0.494
Caci_5919
PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV_1734 oxidoreductase.
 
  
 0.483
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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