STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_7815PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: sma:SAV_3082 molybdopterin biosynthesis-like protein MoeZ. (393 aa)    
Predicted Functional Partners:
Caci_7931
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: sgr:SGR_2323 putative molybdopterin biosynthesis protein E.
 0.996
Caci_7560
PFAM: thiamineS protein; KEGG: tfu:Tfu_2369 hypothetical protein.
 
 0.994
Caci_8124
PFAM: thiamineS protein; KEGG: sco:SCO4294 hypothetical protein.
 
 0.993
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 0.975
Caci_8251
PFAM: thiamineS protein; KEGG: sgr:SGR_3962 putative molybdopterin converting factor.
  
 0.974
Caci_5998
TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: ace:Acel_0988 thiamine biosynthesis protein ThiS.
 
 
 0.970
Caci_0546
PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: afe:Lferr_0188 aminotransferase class V.
   
 0.968
Caci_1302
PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sgr:SGR_2029 putative pyridoxal-phosphate- dependent aminotransferase.
   
 0.968
Caci_1666
Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: sco:SCO2157 aminotransferase.
   
 0.968
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
  
 0.889
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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