STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_8136PFAM: protein of unknown function DUF214; KEGG: tfu:Tfu_1848 putative ABC transporter integral membrane protein. (855 aa)    
Predicted Functional Partners:
Caci_8137
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fre:Franean1_4887 ABC transporter related.
 
  
 0.956
Caci_7899
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3111 ABC transport system ATP-binding protein.
 
  
 0.815
Caci_8290
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO1032 ABC transport system ATP-binding protein.
 
  
 0.815
Caci_4457
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4185 ABC transporter related.
 
  
 0.801
Caci_0692
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_5430 ABC transporter ATP-binding protein.
 
  
 0.795
Caci_1914
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_7405 ABC transporter ATP-binding protein.
 
  
 0.761
Caci_4159
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_3757 putative ABC transporter ATP- binding protein.
 
  
 0.495
Caci_4805
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_3757 putative ABC transporter ATP- binding protein.
 
  
 0.483
macB
ABC transporter related; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.453
Caci_8342
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_1869 ABC transporter-related protein.
 
  
 0.441
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.