Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_8408 | Caci_8409 | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sgr:SGR_2763 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | KEGG: tfu:Tfu_2237 hypothetical protein. | 0.773 |
Caci_8408 | Caci_8410 | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sgr:SGR_2763 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein; KEGG: nca:Noca_3929 integral membrane protein. | 0.508 |
Caci_8409 | Caci_8408 | KEGG: tfu:Tfu_2237 hypothetical protein. | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sgr:SGR_2763 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.773 |
Caci_8409 | Caci_8410 | KEGG: tfu:Tfu_2237 hypothetical protein. | Hypothetical protein; KEGG: nca:Noca_3929 integral membrane protein. | 0.508 |
Caci_8410 | Caci_8408 | Hypothetical protein; KEGG: nca:Noca_3929 integral membrane protein. | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sgr:SGR_2763 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.508 |
Caci_8410 | Caci_8409 | Hypothetical protein; KEGG: nca:Noca_3929 integral membrane protein. | KEGG: tfu:Tfu_2237 hypothetical protein. | 0.508 |
Caci_8410 | Caci_8411 | Hypothetical protein; KEGG: nca:Noca_3929 integral membrane protein. | PFAM: Xanthine/uracil/vitamin C permease; KEGG: sma:SAV_6386 hypoxanthine/guanine permease. | 0.674 |
Caci_8411 | Caci_8410 | PFAM: Xanthine/uracil/vitamin C permease; KEGG: sma:SAV_6386 hypoxanthine/guanine permease. | Hypothetical protein; KEGG: nca:Noca_3929 integral membrane protein. | 0.674 |