STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_8502KEGG: fra:Francci3_3854 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase. (510 aa)    
Predicted Functional Partners:
Caci_8498
Acetyltransferase; KEGG: ace:Acel_1935 acetyltransferase.
  
 0.928
Caci_8499
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ace:Acel_1938 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.903
Caci_8500
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NmrA family protein; KEGG: aau:AAur_2151 putative UDP-glucose 4- epimerase.
 
  
 0.860
Caci_3366
KEGG: fal:FRAAL3957 hypothetical protein.
  
  
 0.832
Caci_8456
PFAM: polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4- dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: nca:Noca_4184 polysaccharide biosynthesis protein CapD.
  
 0.813
Caci_8501
PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: ace:Acel_1937 oxidoreductase domain- containing protein.
 
     0.807
Caci_8497
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: art:Arth_4056 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.792
Caci_8503
PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_0885 glycosyltransferase.
 
  
 0.787
Caci_8491
PFAM: O-antigen polymerase; KEGG: art:Arth_4126 O-antigen polymerase.
  
  
 0.743
Caci_4590
PFAM: Nucleotidyl transferase; KEGG: saq:Sare_0882 mannose-1-phosphate guanylyltransferase (GDP).
 
  
 0.740
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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