STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_8844TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sco:SCO1046 metal transporter ATPase. (764 aa)    
Predicted Functional Partners:
Caci_1795
PFAM: Heavy metal transport/detoxification protein; KEGG: fal:FRAAL0988 putative regulator.
 
 
 0.987
Caci_2471
PFAM: Heavy metal transport/detoxification protein; KEGG: sgr:SGR_4828 putative copper chaperone.
 
 
 0.985
Caci_5191
PFAM: protein of unknown function DUF156; KEGG: nfa:nfa8420 hypothetical protein.
 
  
 0.824
Caci_7671
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: sma:SAV_4877 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
  
  
 0.572
pgk
PFAM: phosphoglycerate kinase; KEGG: tfu:Tfu_2016 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
   
 0.536
Caci_8845
PFAM: Domain of unknown function DUF1906; KEGG: sma:SAV_6085 hypothetical protein.
       0.520
Caci_3496
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: mpa:MAP3944c hypothetical protein.
   
 
 0.502
Caci_4287
KEGG: rha:RHA1_ro03536 hypothetical protein.
 
  
 0.484
Caci_2470
KEGG: rha:RHA1_ro03536 hypothetical protein.
 
  
 0.463
Caci_1126
PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: sgr:SGR_3627 putative integral membrane protein.
     
 0.447
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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