STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0065PFAM: Transglycosylase-associated protein; KEGG: aoe:Clos_0560 transglycosylase-associated protein. (85 aa)    
Predicted Functional Partners:
Sthe_0066
Hypothetical protein.
       0.561
Sthe_3095
PFAM: CsbD family protein; KEGG: kpe:KPK_5242 putative stress-response protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.446
Sthe_0064
Hypothetical protein; KEGG: rxy:Rxyl_2488 putative transposase.
       0.426
Sthe_0067
PFAM: protein of unknown function DUF1634; KEGG: lwe:lwe2352 hypothetical protein.
       0.402
Sthe_0068
PFAM: protein of unknown function DUF81; KEGG: mta:Moth_0371 hypothetical protein.
       0.402
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.