STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0478Hypothetical protein. (195 aa)    
Predicted Functional Partners:
hisS
KEGG: rca:Rcas_0121 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein.
       0.660
Sthe_0477
Hypothetical protein.
       0.651
Sthe_1141
PFAM: oxidoreductase domain protein; Oxidoreductase domain; dihydrodipicolinate reductase; KEGG: cau:Caur_1630 oxidoreductase domain- containing protein.
  
  
 0.604
Sthe_1362
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: jan:Jann_4111 oxidoreductase-like.
  
  
 0.604
Sthe_2759
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bph:Bphy_1594 oxidoreductase domain- containing protein.
  
  
 0.604
Sthe_1951
Aldolase; KEGG: sat:SYN_00557 aldolase.
  
  
 0.415
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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