STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0523KEGG: ank:AnaeK_0247 phosphoribosyltransferase. (235 aa)    
Predicted Functional Partners:
Sthe_0385
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rrs:RoseRS_4590 DNA protecting protein DprA.
 
 
 0.915
Sthe_1700
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: cau:Caur_2622 ComEC/Rec2-related protein.
 
  
 0.857
Sthe_0347
TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rca:Rcas_0037 DNA repair protein RadC; Belongs to the UPF0758 family.
  
    0.805
Sthe_0803
PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rca:Rcas_2997 prephenate dehydrogenase.
   
  
 0.803
Sthe_2695
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: gsu:GSU2016 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
  
  
 0.795
Sthe_0522
PFAM: protein of unknown function DUF192; KEGG: rrs:RoseRS_1277 hypothetical protein.
       0.793
Sthe_2726
Mg chelatase, subunit ChlI; KEGG: gsu:GSU0489 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
  
 0.777
Sthe_2209
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: stp:Strop_0245 N-acetylglucosamine-6- phosphate deacetylase.
  
    0.765
Sthe_0521
PFAM: type II secretion system protein; KEGG: rrs:RoseRS_1276 type II secretion system protein.
  
    0.758
Sthe_3321
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gem:GM21_1647 ABC transporter related.
   
    0.755
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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