STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0684TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: sen:SACE_5069 aspartate racemase; Belongs to the aspartate/glutamate racemases family. (247 aa)    
Predicted Functional Partners:
Sthe_2990
PFAM: Asparaginase/glutaminase; KEGG: scl:sce3372 L-asparaginase.
    
 0.919
pyrB
KEGG: aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB); K00609 aspartate carbamoyltransferase catalytic chain; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.916
Sthe_0206
KEGG: mka:MK0942 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.900
Sthe_0843
PFAM: aminotransferase class I and II; KEGG: mbu:Mbur_0428 aspartate aminotransferase.
    
  0.900
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
  0.900
Sthe_2484
PFAM: peptidase T2 asparaginase 2; KEGG: ftn:FTN_0588 asparaginase.
     
  0.900
Sthe_2604
PFAM: aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: fph:Fphi_0426 aspartate aminotransferase.
    
  0.900
Sthe_3070
PFAM: aminotransferase class I and II; KEGG: ank:AnaeK_1558 aminotransferase class I and II.
    
  0.900
argG
Argininosuccinate synthase; KEGG: Os12g0235800; hypothetical protein; K01940 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.900
Sthe_2746
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sfu:Sfum_2312 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
    
  0.803
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.