STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0736KEGG: cco:CCC13826_1728 hypothetical protein. (219 aa)    
Predicted Functional Partners:
Sthe_0737
PFAM: ABC transporter related; periplasmic copper- binding; SMART: AAA ATPase; Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: sun:SUN_2177 nitrous oxidase accessory protein NosD.
 
 0.999
Sthe_0738
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_1077 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.991
Sthe_0739
KEGG: dsy:DSY0264 hypothetical protein.
 
     0.951
Sthe_0735
Nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II; blue (type 1) copper domain protein; KEGG: mag:amb3086 nitrous oxide reductase.
 
  
 0.938
Sthe_0638
KEGG: nca:Noca_2100 hypothetical protein.
 
     0.645
Sthe_2048
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: tbd:Tbd_0868 nitric oxide reductase activation protein.
  
    0.611
Sthe_1080
KEGG: saq:Sare_4167 hypothetical protein.
  
 
 0.584
Sthe_2192
KEGG: rca:Rcas_3764 hypothetical protein.
  
 
 0.584
Sthe_0186
KEGG: nfa:nfa4210 hypothetical protein.
  
 
 0.575
Sthe_1082
KEGG: kra:Krad_3976 hypothetical protein.
  
 
 0.575
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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