STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0977PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2427 GCN5-related N- acetyltransferase. (297 aa)    
Predicted Functional Partners:
Sthe_3513
KEGG: scl:sce0055 hypothetical protein.
  
     0.762
Sthe_1860
KEGG: rrs:RoseRS_0243 glycosyl transferase family protein.
  
     0.756
Sthe_0921
KEGG: rrs:RoseRS_3193 hypothetical protein.
  
    0.752
Sthe_0335
PFAM: SCP-like extracellular; KEGG: cau:Caur_3540 hypothetical protein.
  
     0.740
Sthe_0469
Putative transmembrane anti-sigma factor; KEGG: rca:Rcas_0510 serine/threonine protein kinase.
  
     0.735
Sthe_2100
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: hau:Haur_2733 VanW family protein.
  
    0.734
Sthe_2241
KEGG: rsq:Rsph17025_0127 ATPase-like protein.
  
     0.725
Sthe_1861
Membrane-bound mannosyltransferase-like protein; KEGG: hau:Haur_3865 NHL repeat-containing protein.
  
    0.720
Sthe_0506
KEGG: hau:Haur_1454 hypothetical protein.
  
     0.718
Sthe_0976
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: hau:Haur_2247 extracellular solute-binding protein.
       0.716
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.