STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_0983KEGG: nfa:nfa44670 hypothetical protein. (180 aa)    
Predicted Functional Partners:
Sthe_0984
PFAM: protein of unknown function DUF55; KEGG: pho:PH1033 hypothetical protein.
       0.762
Sthe_0985
PFAM: FAD linked oxidase domain protein; KEGG: rca:Rcas_4146 D-lactate dehydrogenase (cytochrome).
  
    0.494
Sthe_0986
PFAM: FAD linked oxidase domain protein; KEGG: cau:Caur_2133 FAD linked oxidase domain- containing protein.
  
    0.476
Sthe_0987
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cau:Caur_2135 hypothetical protein.
       0.411
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.