STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_1123PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KEGG: rrs:RoseRS_1853 NAD-dependent epimerase/dehydratase. (315 aa)    
Predicted Functional Partners:
Sthe_2741
KEGG: afw:Anae109_1412 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate glucose phosphotransferase; PFAM: sugar transferase.
  
  
 0.950
Sthe_3213
KEGG: mxa:MXAN_2922 sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate glucose phosphotransferase; PFAM: sugar transferase.
  
  
 0.950
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 
0.935
Sthe_1889
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fre:Franean1_1562 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.911
Sthe_2758
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rlg:Rleg_6222 glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.911
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
 
     0.706
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.518
Sthe_1142
PFAM: sugar transferase; KEGG: lch:Lcho_1395 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.510
Sthe_2755
PFAM: sugar transferase; KEGG: afw:Anae109_1412 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.510
Sthe_3440
PFAM: sugar transferase; KEGG: afw:Anae109_1412 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.510
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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