STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_1326PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2261 glycosyl transferase group 1. (431 aa)    
Predicted Functional Partners:
Sthe_1324
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0982 glycosyl transferase group 1.
 
     0.945
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.939
glgE
Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.908
Sthe_1953
PFAM: glycosyl transferase family 20; KEGG: rxy:Rxyl_2972 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
    
 0.903
Sthe_1074
KEGG: cau:Caur_3182 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
     
 0.902
Sthe_2106
PFAM: glycosyl transferase group 1; SMART: TRASH domain protein; KEGG: rxy:Rxyl_3082 glycosyl transferase, group 1.
     
  0.900
Sthe_1323
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0218 glycosyl transferase group 1.
 
     0.897
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.808
Sthe_1322
PFAM: protein of unknown function DUF343; KEGG: pca:Pcar_1262 hypothetical protein; Belongs to the UPF0434 family.
       0.773
Sthe_1325
KEGG: cau:Caur_0983 hypothetical protein.
       0.773
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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