STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_1576KEGG: rrs:RoseRS_1626 hypothetical protein. (381 aa)    
Predicted Functional Partners:
Sthe_0236
KEGG: rrs:RoseRS_2358 hypothetical protein.
  
     0.734
Sthe_0335
PFAM: SCP-like extracellular; KEGG: cau:Caur_3540 hypothetical protein.
  
     0.718
Sthe_1575
Hypothetical protein.
       0.689
Sthe_1693
KEGG: rrs:RoseRS_3712 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.676
Sthe_0357
PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rca:Rcas_3535 hypothetical protein.
  
     0.635
Sthe_1345
KEGG: hau:Haur_3384 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.625
Sthe_1573
KEGG: det:DET0327 hypothetical protein.
 
     0.625
Sthe_1574
KEGG: det:DET0328 hypothetical protein.
 
     0.621
Sthe_1396
KEGG: rrs:RoseRS_0006 hypothetical protein.
  
     0.612
Sthe_3090
KEGG: bbt:BBta_1040 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.606
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.