STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_1678KEGG: fre:Franean1_4993 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (326 aa)    
Predicted Functional Partners:
Sthe_1679
PFAM: ABC-2 type transporter; KEGG: fal:FRAAL2277 putative integral membrane transport protein.
    0.959
Sthe_2801
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_1705 ABC transporter related.
 
     
0.896
Sthe_0873
PFAM: ABC-2 type transporter; KEGG: rha:RHA1_ro06840 ABC daunorubicin resistance transporter, transmembrane permease component.
 
    0.816
Sthe_0175
PFAM: ABC-2 type transporter; KEGG: sma:SAV_6712 ABC-type drug export system, membrane protein.
  
    0.812
Sthe_0430
PFAM: ABC-2 type transporter; KEGG: sma:SAV_6712 ABC-type drug export system, membrane protein.
 
    0.811
Sthe_2138
PFAM: ABC-2 type transporter; KEGG: mta:Moth_2298 daunorubicin resistance ABC transporter membrane protein.
 
    0.793
Sthe_3364
PFAM: ABC-2 type transporter; KEGG: aha:AHA_0486 ABC-type multidrug transport system, permease component.
 
    0.693
Sthe_2670
PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter permease.
 
    0.601
Sthe_1677
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: cau:Caur_0999 regulatory protein TetR.
       0.540
Sthe_2180
PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1654 hypothetical protein.
  
    0.440
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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