STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2161PFAM: Polysulphide reductase NrfD; KEGG: gme:Gmet_1812 polysulphide reductase, NrfD. (457 aa)    
Predicted Functional Partners:
Sthe_2163
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_2776 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.985
Sthe_2159
Hypothetical protein; KEGG: mxa:MXAN_5554 cytochrome c family protein.
 
 
 
 0.984
Sthe_2164
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: gur:Gura_2777 nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.978
Sthe_2165
KEGG: lic:LIC10873 hypothetical protein.
 
 
 
 0.972
Sthe_2200
PFAM: cytochrome c class I; KEGG: lic:LIC10208 cytochrome c oxidase polypeptide II.
 
 
 
 0.934
Sthe_2160
KEGG: gur:Gura_2774 hypothetical protein.
 
     0.932
Sthe_2476
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: afw:Anae109_0861 4Fe-4S ferredoxin iron- sulfur binding domain-containing protein.
 
 
 0.863
Sthe_3389
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: acp:A2cp1_0875 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.845
Sthe_0099
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: rrs:RoseRS_4542 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.815
Sthe_3388
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide- binding region; KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.805
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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