STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2184PFAM: extracellular solute-binding protein family 5; KEGG: ava:Ava_1563 extracellular solute-binding protein. (629 aa)    
Predicted Functional Partners:
Sthe_1461
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cyt:cce_0991 permease protein of ABC transporter.
 
   0.822
Sthe_1460
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0890 binding-protein-dependent transport systems inner membrane component.
   0.812
Sthe_1457
PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_2784 extracellular solute-binding protein.
  
  
 
0.526
Sthe_2183
PFAM: protein of unknown function DUF309; KEGG: rxy:Rxyl_2442 protein of unknown function DUF309.
       0.506
Sthe_0387
PFAM: extracellular solute-binding protein family 5; KEGG: gsu:GSU1433 peptide ABC transporter, periplasmic peptide-binding protein.
  
  
 
0.491
Sthe_1622
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: bld:BLi01226 AppA.
  
  
 
0.482
Sthe_2925
PFAM: extracellular solute-binding protein family 5; KEGG: glo:Glov_2097 4-phytase.
  
  
 
0.482
Sthe_2926
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6713 ABC transporter permease.
 
   0.480
Sthe_1249
PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_2333 extracellular solute-binding protein.
  
  
 
0.465
Sthe_2600
PFAM: extracellular solute-binding protein family 5; KEGG: sat:SYN_00608 oligopeptide-binding protein.
  
  
 
0.460
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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