STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2475Nitrate reductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (863 aa)    
Predicted Functional Partners:
Sthe_2474
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: gbm:Gbem_2182 molybdopterin oxidoreductase Fe4s4 region.
  
  0.999
Sthe_2476
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: afw:Anae109_0861 4Fe-4S ferredoxin iron- sulfur binding domain-containing protein.
 
 0.997
Sthe_3389
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: acp:A2cp1_0875 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 0.988
Sthe_3388
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide- binding region; KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
0.913
Sthe_1570
PFAM: Acetamidase/Formamidase; KEGG: gka:GK1391 acetamidase/formamidase.
     
  0.900
Sthe_1651
PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: chy:CHY_0733 NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing.
     
 
0.900
Sthe_2468
Formamidase; PFAM: Acetamidase/Formamidase; KEGG: bbr:BB1405 formamidase.
     
  0.900
Sthe_2487
Formamidase; PFAM: Acetamidase/Formamidase; KEGG: rlg:Rleg_0022 formamidase.
     
  0.900
Sthe_3425
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: afw:Anae109_0561 alcohol dehydrogenase.
     
  0.900
Sthe_2477
PFAM: Polysulphide reductase NrfD; KEGG: ade:Adeh_0822 polysulphide reductase, NrfD.
 
     0.884
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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