STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2618PFAM: amidinotransferase; KEGG: vei:Veis_3194 amidinotransferase. (334 aa)    
Predicted Functional Partners:
Sthe_1795
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
  
 0.898
Sthe_2617
PFAM: Amidohydrolase 3; KEGG: sme:SMa0101 amidohydrolase.
 
     0.638
Sthe_2502
KEGG: scl:sce7359 amino acid transporter.
  
  
 0.559
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
       0.536
Sthe_2391
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: cau:Caur_0597 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
   
    0.521
Sthe_2501
TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: tbd:Tbd_0006 hypothetical protein.
   
    0.521
Sthe_3187
TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: tgr:Tgr7_1947 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
   
    0.521
Sthe_2616
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tmz:Tmz1t_0427 binding-protein-dependent transport systems inner membrane component.
     
 0.486
Sthe_0266
KEGG: pfl:PFL_0337 hypothetical protein.
 
     0.460
Sthe_2592
KEGG: pfl:PFL_0337 hypothetical protein.
 
     0.451
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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