STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2670PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter permease. (359 aa)    
Predicted Functional Partners:
Sthe_2671
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_1597 ABC transporter, ATP-binding protein.
    0.955
Sthe_2179
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fra:Francci3_1655 ABC transporter related.
    0.796
Sthe_3365
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pag:PLES_25911 ATP-binding protein.
 
    0.792
Sthe_0418
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hau:Haur_2550 ABC transporter related.
 
    0.781
Sthe_2137
KEGG: mta:Moth_2297 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
    0.774
Sthe_2097
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: deb:DehaBAV1_0253 ABC transporter related.
 
    0.727
Sthe_0431
KEGG: sma:SAV_6711 ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.682
Sthe_0176
KEGG: sma:SAV_6711 ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.673
Sthe_1678
KEGG: fre:Franean1_4993 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.601
Sthe_2328
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY1441 hypothetical protein.
 
    0.583
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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