STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2803KEGG: rpi:Rpic_1959 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase. (251 aa)    
Predicted Functional Partners:
Sthe_0141
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: oca:OCAR_7510 aryldialkylphosphatase.
      0.854
Sthe_2804
KEGG: ssn:SSON_4498 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.833
dapA
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.785
Sthe_2805
TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: hypothetical protein.
 
  
 0.677
Sthe_2800
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: bvi:Bcep1808_0100 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
       0.631
Sthe_2801
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_1705 ABC transporter related.
       0.631
Sthe_2799
PFAM: inner-membrane translocator; KEGG: glo:Glov_1862 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.591
Sthe_2806
TIGRFAM: 3,4-dihydroxyphenylacetate 2,3- dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bav:BAV1269 catechol 2,3-dioxygenase (metapyrocatechase).
 
     0.543
Sthe_2798
PFAM: Extracellular ligand-binding receptor; KEGG: sfu:Sfum_4069 extracellular ligand-binding receptor.
  
    0.411
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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