node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sthe_1312 | Sthe_2830 | Sthe_1312 | Sthe_2830 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | 0.838 |
Sthe_1312 | polA | Sthe_1312 | Sthe_1591 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
Sthe_1312 | recA | Sthe_1312 | Sthe_0924 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.920 |
Sthe_1312 | rpoA | Sthe_1312 | Sthe_1064 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.458 |
Sthe_1312 | rpoB | Sthe_1312 | Sthe_1029 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.682 |
Sthe_1312 | rpoC | Sthe_1312 | Sthe_1030 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.747 |
Sthe_1396 | Sthe_2830 | Sthe_1396 | Sthe_2830 | KEGG: rrs:RoseRS_0006 hypothetical protein. | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | 0.767 |
Sthe_2380 | Sthe_2830 | Sthe_2380 | Sthe_2830 | PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | 0.721 |
Sthe_2380 | polA | Sthe_2380 | Sthe_1591 | PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.556 |
Sthe_2380 | rpoA | Sthe_2380 | Sthe_1064 | PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.671 |
Sthe_2380 | rpoB | Sthe_2380 | Sthe_1029 | PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.672 |
Sthe_2380 | rpoC | Sthe_2380 | Sthe_1030 | PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.748 |
Sthe_2827 | Sthe_2829 | Sthe_2827 | Sthe_2829 | ATPase (AAA+ superfamily)-like protein; KEGG: rpa:RPA2221 hypothetical protein. | PFAM: protein of unknown function DUF1156; KEGG: afw:Anae109_3987 hypothetical protein. | 0.885 |
Sthe_2827 | Sthe_2830 | Sthe_2827 | Sthe_2830 | ATPase (AAA+ superfamily)-like protein; KEGG: rpa:RPA2221 hypothetical protein. | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | 0.872 |
Sthe_2829 | Sthe_2827 | Sthe_2829 | Sthe_2827 | PFAM: protein of unknown function DUF1156; KEGG: afw:Anae109_3987 hypothetical protein. | ATPase (AAA+ superfamily)-like protein; KEGG: rpa:RPA2221 hypothetical protein. | 0.885 |
Sthe_2829 | Sthe_2830 | Sthe_2829 | Sthe_2830 | PFAM: protein of unknown function DUF1156; KEGG: afw:Anae109_3987 hypothetical protein. | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | 0.950 |
Sthe_2830 | Sthe_1312 | Sthe_2830 | Sthe_1312 | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.838 |
Sthe_2830 | Sthe_1396 | Sthe_2830 | Sthe_1396 | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | KEGG: rrs:RoseRS_0006 hypothetical protein. | 0.767 |
Sthe_2830 | Sthe_2380 | Sthe_2830 | Sthe_2380 | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.721 |
Sthe_2830 | Sthe_2827 | Sthe_2830 | Sthe_2827 | PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: noc:Noc_0545 helicase-like. | ATPase (AAA+ superfamily)-like protein; KEGG: rpa:RPA2221 hypothetical protein. | 0.872 |