STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_2875PFAM: inner-membrane translocator; KEGG: smd:Smed_5342 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (296 aa)    
Predicted Functional Partners:
Sthe_2886
PFAM: inner-membrane translocator; KEGG: bbt:BBta_2886 putative ABC transporter permiase component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
Sthe_2874
PFAM: inner-membrane translocator; KEGG: sme:SMc02360 branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.983
Sthe_3113
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: sfu:Sfum_0384 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
 0.975
Sthe_2800
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: bvi:Bcep1808_0100 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
 0.967
Sthe_2877
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02357 putative high-affinity branched- chain amino acid transport ATP-binding ABC transporter protein.
  
 0.957
Sthe_2703
PFAM: inner-membrane translocator; KEGG: bbr:BB1594 ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 0.953
Sthe_2876
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_4073 ABC transporter related.
  
 0.939
Sthe_1537
PFAM: inner-membrane translocator; KEGG: msm:MSMEG_1219 ABC-type transport system permease protein II.
  
 0.930
Sthe_2885
PFAM: inner-membrane translocator; KEGG: pub:SAR11_0656 branched chain amino acid ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.927
Sthe_2878
PFAM: Extracellular ligand-binding receptor; KEGG: smd:Smed_5345 extracellular ligand-binding receptor.
 
  
 0.917
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.