STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Sthe_3208PFAM: extracellular solute-binding protein family 1; KEGG: mxa:MXAN_0770 iron ABC transporter, periplasmic iron-binding protein. (394 aa)    
Predicted Functional Partners:
Sthe_3207
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_0771 iron ABC transporter, permease protein.
 
 0.998
Sthe_3206
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eba:ebA4892 transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.973
Sthe_2716
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpe:BP2552 ABC transport protein, solute- binding protein.
 
 
 0.972
Sthe_2715
PFAM: extracellular solute-binding protein family 1; KEGG: bpe:BP2553 hypothetical protein.
  
  
  0.914
Sthe_2719
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3496 ABC transporter related.
 
 
 0.841
Sthe_3382
PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR1961 major facilitator superfamily transporter transmembrane protein.
 
  
 0.637
Sthe_0090
PFAM: major facilitator superfamily MFS_1; KEGG: rpd:RPD_4393 major facilitator transporter.
  
  
 0.547
Sthe_2749
PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_2536 major facilitator transporter.
  
  
 0.547
Sthe_3209
Hypothetical protein.
       0.455
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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