STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sthe_3428PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecc:c0916 ABC transporter permease. (308 aa)    
Predicted Functional Partners:
Sthe_3429
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1183 putative permease of ABC transporter.
    0.921
Sthe_2203
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH2313 oligopeptide ABC transporter permease protein.
    0.836
Sthe_1511
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_3840 binding-protein-dependent transport systems inner membrane component.
   
0.802
Sthe_2844
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bph:Bphy_6649 binding-protein-dependent transport systems inner membrane component.
    0.755
Sthe_0260
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH2313 oligopeptide ABC transporter permease protein.
    0.737
Sthe_2554
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_0870 binding-protein-dependent transport systems inner membrane component.
 
    0.735
Sthe_1893
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_4454 opine ABC transporter, permease protein, putative.
 
    0.731
Sthe_0975
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein.
    0.728
Sthe_3427
PFAM: extracellular solute-binding protein family 5; KEGG: gsu:GSU1433 peptide ABC transporter, periplasmic peptide-binding protein.
   0.727
Sthe_3039
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr5418 ABC transporter permease protein.
 
    0.717
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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