STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0069PFAM: cyclase/dehydrase; KEGG: cti:RALTA_B1222 putative cyclase/dehydrase; putatively involved in polyketide (linear poly-beta- ketones) synthesis; antibiotic biosynthesis. (153 aa)    
Predicted Functional Partners:
Kfla_0070
PFAM: aminotransferase class I and II; KEGG: sme:SMc04326 putative aminotransferase protein.
  
    0.777
Kfla_1925
PFAM: protein of unknown function DUF1469; KEGG: pzu:PHZ_c1049 hypothetical protein.
 
     0.460
Kfla_0071
PFAM: extracellular solute-binding protein family 1; KEGG: smt:Smal_2683 extracellular solute-binding protein family 1.
       0.418
Kfla_0072
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0710 ABC transporter, permease.
       0.418
Kfla_0073
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component.
       0.418
Kfla_6178
Hypothetical protein.
 
     0.408
Kfla_5632
Hypothetical protein; KEGG: sde:Sde_2765 TonB-dependent siderophore receptor.
  
     0.404
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.