STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0084PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: mxa:MXAN_3639 iron-chelator utilization protein. (276 aa)    
Predicted Functional Partners:
Kfla_0085
PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mxa:MXAN_2180 NADP oxidoreductase, coenzyme F420-dependent.
       0.570
Kfla_0083
KEGG: eba:ebA4606 hypothetical protein.
       0.474
Kfla_1320
PFAM: periplasmic binding protein; KEGG: oan:Oant_2827 periplasmic binding protein.
 
  
 0.447
Kfla_4118
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: mxa:MXAN_4079 non-ribosomal peptide synthetase.
  
  
 0.442
Kfla_3437
KEGG: geo:Geob_2655 hypothetical protein.
   
  
 0.403
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.