STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_0167PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: mex:Mext_2356 lipid ABC transporter ATPase/inner membrane protein. (593 aa)    
Predicted Functional Partners:
Kfla_0166
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: maq:Maqu_2187 ABC transporter related.
    
0.923
Kfla_1199
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rme:Rmet_0705 ABC transporter-related protein.
    
0.747
Kfla_4728
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_4408 amino acid ABC transporter ATP- binding protein.
 
     
0.708
Kfla_5302
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: asa:ASA_2284 ABC-type multidrug transporter, ATP-binding protein.
    
0.700
Kfla_0165
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; dienelactone hydrolase; KEGG: oan:Oant_3086 peptidase S9 prolyl oligopeptidase active site domain protein.
       0.693
Kfla_5198
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3762 ABC transporter-related protein.
 
     
0.604
Kfla_5505
Snapalysin; PFAM: peptidase M7 snapalysin.
  
 
   0.572
Kfla_0168
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2818 major facilitator transporter.
   
   0.520
Kfla_4655
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: met:M446_3923 oligopeptide/dipeptide ABC transporter, ATPase subunit.
     
0.504
Kfla_6499
Serine/threonine protein kinase; PFAM: Lanthionine synthetase C family protein; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: smt:Smal_2130 serine/threonine protein kinase.
  
     0.460
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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