STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (501 aa)    
Predicted Functional Partners:
Kfla_0257
PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_5683 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.997
Kfla_0258
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1037 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 0.994
Kfla_0259
TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bpy:Bphyt_5681 rhamnose ABC transporter, periplasmic rhamnose-binding protein.
 
 0.982
Kfla_1775
PFAM: inner-membrane translocator; KEGG: mlo:mlr8216 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.940
Kfla_4278
PFAM: inner-membrane translocator; KEGG: psp:PSPPH_2728 ribose ABC transporter, ATP- binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.911
Kfla_4177
PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_4187 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.876
Kfla_4179
PFAM: inner-membrane translocator; KEGG: rhi:NGR_b04380 putative ribose/xylose/arabinose/galactoside ABC-type transport system, permease components AraH.
 
 0.875
Kfla_4180
KEGG: bpy:Bphyt_4184 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.870
Kfla_1776
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mlr8217 ABC transporter, substrate- binding protein.
 
 0.850
Kfla_2702
PFAM: inner-membrane translocator; KEGG: bov:BOV_A0242 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.823
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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